MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
STF.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 123
bases: 2,698,428 bps
CDS: 2,464
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 2,534
Total number of protein coding genes annotated/found:
2,464
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Items 21 - 40
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of 124 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5004|JADGKH010000076.1
SEQF5004_00150
Genome Viewer
NA
AA
135/45
42495-42629
hypothetical protein
SEQF5004|JADGKH010000041.1
SEQF5004_01431
Genome Viewer
NA
AA
135/45
10374-10508
Antibacterial protein 3
SEQF5004|JADGKH010000041.1
SEQF5004_01432
Genome Viewer
NA
AA
135/45
10565-10699
Antibacterial protein 3
SEQF5004|JADGKH010000112.1
SEQF5004_01747
Genome Viewer
NA
AA
135/45
249-115
hypothetical protein
SEQF5004|JADGKH010000063.1
SEQF5004_02231
Genome Viewer
NA
AA
135/45
76157-76291
hypothetical protein
SEQF5004|JADGKH010000042.1
SEQF5004_00854
Genome Viewer
NA
AA
138/46
242612-242475
50S ribosomal protein L34
SEQF5004|JADGKH010000058.1
SEQF5004_01856
Genome Viewer
NA
AA
138/46
26732-26595
hypothetical protein
SEQF5004|JADGKH010000112.1
SEQF5004_01749
Genome Viewer
NA
AA
141/47
1052-1192
hypothetical protein
SEQF5004|JADGKH010000040.1
SEQF5004_00057
Genome Viewer
NA
AA
147/49
62859-63005
hypothetical protein
SEQF5004|JADGKH010000076.1
SEQF5004_00114
Genome Viewer
NA
AA
147/49
29470-29324
hypothetical protein
SEQF5004|JADGKH010000087.1
SEQF5004_00890
Genome Viewer
NA
AA
147/49
10315-10169
hypothetical protein
SEQF5004|JADGKH010000063.1
SEQF5004_02232
Genome Viewer
NA
AA
147/49
76727-76581
hypothetical protein
SEQF5004|JADGKH010000085.1
SEQF5004_02429
Genome Viewer
NA
AA
147/49
64567-64713
hypothetical protein
SEQF5004|JADGKH010000076.1
SEQF5004_00135
Genome Viewer
NA
AA
150/50
36505-36356
hypothetical protein
SEQF5004|JADGKH010000051.1
SEQF5004_00485
Genome Viewer
NA
AA
150/50
53561-53412
50S ribosomal protein L33 2
SEQF5004|JADGKH010000050.1
SEQF5004_00956
Genome Viewer
NA
AA
150/50
20250-20101
50S ribosomal protein L33 2
SEQF5004|JADGKH010000076.1
SEQF5004_00147
Genome Viewer
NA
AA
153/51
41350-41198
hypothetical protein
SEQF5004|JADGKH010000029.1
SEQF5004_00324
Genome Viewer
NA
AA
153/51
54417-54265
hypothetical protein
SEQF5004|JADGKH010000102.1
SEQF5004_00439
Genome Viewer
NA
AA
153/51
62910-63062
hypothetical protein
SEQF5004|JADGKH010000087.1
SEQF5004_00917
Genome Viewer
NA
AA
153/51
35359-35207
hypothetical protein
🡄
Items 21 - 40
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of 124 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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